STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
amb1956Signal transduction histidine kinase. (514 aa)    
Predicted Functional Partners:
amb3654
Hypothetical 1041 kDa protein in hypE 3'region.
 
 
 0.973
amb2932
Methylase of chemotaxis methyl-accepting protein.
 
 
 0.953
amb1947
Predicted ATPase.
 
 
 0.949
amb3195
Signal transduction histidine kinase.
 
 
0.949
amb2936
Predicted ATPase.
 
 
 0.948
amb2639
Signal transduction histidine kinase.
 
 
0.944
amb1110
Signal transduction histidine kinase.
  
 
 0.942
amb2931
Methyl-accepting chemotaxis protein.
 
 0.938
amb1466
Predicted ATPase.
 
 
 0.933
amb2293
Signal transduction histidine kinase.
 
 
0.930
Your Current Organism:
Magnetospirillum magneticum
NCBI taxonomy Id: 342108
Other names: M. magneticum AMB-1, Magnetospirillum magneticum AMB-1, Magnetospirillum magneticum str. AMB-1, Magnetospirillum magneticum strain AMB-1, Magnetospirillum sp. (strain AMB-1), Magnetospirillum sp. AMB-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.