Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
amb1968Signal transduction histidine kinase. (535 aa)    
Predicted Functional Partners:
amb1110
Signal transduction histidine kinase.
 
 
0.951
amb2293
Signal transduction histidine kinase.
 
 
0.951
amb3570
FOG: CheY-like receiver.
 
 0.943
amb1841
Hypothetical protein.
 
 
0.941
amb3438
Sensor protein gacS.
 
 
0.941
amb4146
Signal transduction histidine kinase.
 
 
0.941
amb1432
Signal transduction histidine kinase.
 
 
0.940
amb1967
Signal transduction histidine kinase.
 
0.938
amb1116
Serine phosphatase RsbU regulator sigma subunit.
 
 0.922
amb1370
Response regulator; Consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain.
 
 0.920
Your Current Organism:
Magnetospirillum magneticum
NCBI taxonomy Id: 342108
Other names: M. magneticum AMB-1, Magnetospirillum magneticum AMB-1, Magnetospirillum magneticum str. AMB-1, Magnetospirillum magneticum strain AMB-1, Magnetospirillum sp. (strain AMB-1), Magnetospirillum sp. AMB-1
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