Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
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gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
amb1990Pyruvate-flavodoxin oxidoreductase. (1198 aa)    
Predicted Functional Partners:
amb2145
627aa long 2-oxoacid--ferredoxin oxidoreductasealpha subunit.
  
 0.999
amb2146
Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductase, beta subunit.
  
 0.999
amb1680
NADH dependant phenylglyoxylate.
  
 
 0.991
pckG
Phosphoenolpyruvate carboxykinase; Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP), the rate-limiting step in the metabolic pathway that produces glucose from lactate and other precursors derived from the citric acid cycle; Belongs to the phosphoenolpyruvate carboxykinase [GTP] family.
   
 
 0.984
amb1678
NADH dependant phenylglyoxylate.
 
 
0.983
amb3375
NADPH-dependent glutamate synthase beta chain and related oxidoreductase.
 
 
 0.976
amb1057
Ferredoxin.
  
 
 0.975
amb1832
Arsenical resistance operon trans-acting repressor arsD.
  
 
 0.975
amb4319
Ferredoxin II; Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions.
  
 
 0.975
amb1677
Pyruvate with ferredoxin oxidoreductase and related 2-oxoacid with ferredoxin oxidoreductase; Delta subunit.
  
 
 0.972
Your Current Organism:
Magnetospirillum magneticum
NCBI taxonomy Id: 342108
Other names: M. magneticum AMB-1, Magnetospirillum magneticum AMB-1, Magnetospirillum magneticum str. AMB-1, Magnetospirillum magneticum strain AMB-1, Magnetospirillum sp. (strain AMB-1), Magnetospirillum sp. AMB-1
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