STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
amb2002Serine/threonine protein kinase. (283 aa)    
Predicted Functional Partners:
amb1714
Uncharacterized conserved protein.
 
  
 0.796
amb2003
Hypothetical protein.
       0.613
amb2001
Type V secretory pathway, adhesin AidA.
  
  
 0.611
amb2000
Prophage Qin DNA packaging protein NU1 homolog.
       0.590
amb2663
Uncharacterized conserved protein.
 
  
 0.558
amb2004
Nucleoside 2-deoxyribosyltransferase.
       0.539
amb2565
Uncharacterized conserved protein.
 
  
 0.507
amb3252
Hypothetical protein.
   
 
 0.457
amb1721
Sulfatase modifying factor 2 precursor.
 
  
 0.440
Your Current Organism:
Magnetospirillum magneticum
NCBI taxonomy Id: 342108
Other names: M. magneticum AMB-1, Magnetospirillum magneticum AMB-1, Magnetospirillum magneticum str. AMB-1, Magnetospirillum magneticum strain AMB-1, Magnetospirillum sp. (strain AMB-1), Magnetospirillum sp. AMB-1
Server load: low (26%) [HD]