Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
amb2015Phenylacetyl CoA; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. (911 aa)    
Predicted Functional Partners:
amb1242
Fe-S-cluster-containing hydrogenase components 1.
 
 0.986
amb1680
NADH dependant phenylglyoxylate.
 
 0.962
amb1243
Phenylacetyl CoA.
  
 0.917
amb1241
Phenylacetyl CoA; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
  
  
 
0.902
amb2753
Uncharacterized protein; Possibly involved in aromatic compounds catabolism.
    
  0.902
amb1245
Coenzyme F390 synthetase; Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA).
     
 0.900
amb2755
Coenzyme F390 synthetase; Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA).
     
 0.900
amb1678
NADH dependant phenylglyoxylate.
  
  
 0.869
amb1676
NADH dependant phenylglyoxylate.
  
  
 0.840
amb1679
NADH dependant phenylglyoxylate.
 
 
 0.836
Your Current Organism:
Magnetospirillum magneticum
NCBI taxonomy Id: 342108
Other names: M. magneticum AMB-1, Magnetospirillum magneticum AMB-1, Magnetospirillum magneticum str. AMB-1, Magnetospirillum magneticum strain AMB-1, Magnetospirillum sp. (strain AMB-1), Magnetospirillum sp. AMB-1
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