STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
amb2044Type II restriction enzyme; Methylase subunits. (1198 aa)    
Predicted Functional Partners:
amb2043
Hypothetical protein.
 
  
 0.987
amb2047
Predicted ATP-dependent Lon-type protease.
 
  
 0.969
amb2046
Hypothetical protein.
 
  
 0.962
amb2040
Hypothetical protein.
 
  
 0.955
amb2038
Hypothetical protein.
 
  
 0.954
amb2039
Hypothetical protein.
 
    0.905
amb0411
Transposase; ISmag2; similar to IS4 family.
  
  
 0.828
amb0356
DNA or RNA helicase of superfamily II.
  
  
 0.494
amb2041
Transposase and inactivated derivative; ISmag6,orf2; similar to IS3 family.
       0.460
amb2042
Hypothetical protein; ISmag6,orf1; similar to IS3 family.
       0.460
Your Current Organism:
Magnetospirillum magneticum
NCBI taxonomy Id: 342108
Other names: M. magneticum AMB-1, Magnetospirillum magneticum AMB-1, Magnetospirillum magneticum str. AMB-1, Magnetospirillum magneticum strain AMB-1, Magnetospirillum sp. (strain AMB-1), Magnetospirillum sp. AMB-1
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.