Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 annotation | node2 annotation | score |
| amb0029 | amb2081 | DNA polymerase III; Delta subunit. | Predicted transcriptional regulator. | 0.726 |
| amb0029 | amb2261 | DNA polymerase III; Delta subunit. | Recombinational DNA repair protein; RecF pathway. | 0.501 |
| amb0029 | amb2680 | DNA polymerase III; Delta subunit. | Uncharacterized protein; Conserved in bacteria. | 0.468 |
| amb0029 | amb2682 | DNA polymerase III; Delta subunit. | Hypothetical protein. | 0.702 |
| amb2079 | amb2080 | Bacterial nucleoid DNA-binding protein; Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions. | Transcriptional regulatory protein ros. | 0.773 |
| amb2079 | amb2081 | Bacterial nucleoid DNA-binding protein; Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions. | Predicted transcriptional regulator. | 0.773 |
| amb2080 | amb2079 | Transcriptional regulatory protein ros. | Bacterial nucleoid DNA-binding protein; Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions. | 0.773 |
| amb2080 | amb2081 | Transcriptional regulatory protein ros. | Predicted transcriptional regulator. | 0.773 |
| amb2081 | amb0029 | Predicted transcriptional regulator. | DNA polymerase III; Delta subunit. | 0.726 |
| amb2081 | amb2079 | Predicted transcriptional regulator. | Bacterial nucleoid DNA-binding protein; Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions. | 0.773 |
| amb2081 | amb2080 | Predicted transcriptional regulator. | Transcriptional regulatory protein ros. | 0.773 |
| amb2081 | amb2261 | Predicted transcriptional regulator. | Recombinational DNA repair protein; RecF pathway. | 0.727 |
| amb2081 | amb2680 | Predicted transcriptional regulator. | Uncharacterized protein; Conserved in bacteria. | 0.651 |
| amb2081 | amb2682 | Predicted transcriptional regulator. | Hypothetical protein. | 0.667 |
| amb2081 | amb3839 | Predicted transcriptional regulator. | Protein mraZ; Belongs to the MraZ family. | 0.628 |
| amb2081 | amb3864 | Predicted transcriptional regulator. | Hypothetical protein. | 0.641 |
| amb2081 | amb3865 | Predicted transcriptional regulator. | Hypothetical protein. | 0.656 |
| amb2081 | amb3866 | Predicted transcriptional regulator. | Hypothetical protein. | 0.620 |
| amb2261 | amb0029 | Recombinational DNA repair protein; RecF pathway. | DNA polymerase III; Delta subunit. | 0.501 |
| amb2261 | amb2081 | Recombinational DNA repair protein; RecF pathway. | Predicted transcriptional regulator. | 0.727 |
page 1 of 3