STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
amb2085Predicted phosphatase homologous to the C-terminal domain of histone macroH2A1. (172 aa)    
Predicted Functional Partners:
amb3482
ATPase related to the helicase subunit of the Holliday junction resolvase.
      0.910
amb2087
Hypothetical protein.
  
    0.798
amb2086
Lactoylglutathione lyase and related lyase.
       0.775
amb1627
ADP-ribosylglycohydrolase.
    
 0.774
amb1576
ADP-ribosyl-[dinitrogen reductase] glycohydrolase.
    
 0.766
cmk
Cytidylate kinase.
 
      0.654
amb2088
Dehydrogenase with different specificities; Related to short-chain alcohol dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
       0.453
purF
Glutamine phosphoribosylpyrophosphate amidotransferase; Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine.
       0.453
amb3037
Protein implicated in iron transport; Involved in iron-sulfur (Fe-S) cluster assembly. May act as a regulator of Fe-S biogenesis.
  
    0.416
Your Current Organism:
Magnetospirillum magneticum
NCBI taxonomy Id: 342108
Other names: M. magneticum AMB-1, Magnetospirillum magneticum AMB-1, Magnetospirillum magneticum str. AMB-1, Magnetospirillum magneticum strain AMB-1, Magnetospirillum sp. (strain AMB-1), Magnetospirillum sp. AMB-1
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