STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
amb2093ABC-type transport system involved in resistance to organic solvents; ATPase component. (257 aa)    
Predicted Functional Partners:
amb2094
ABC-type transport system involved in resistance to organic solvents; Permease component.
 0.999
amb0332
ABC-type transport system; Involved in resistance to organic solvents, permease component.
 0.993
amb2743
ABC-type transport system involved in resistance to organic solvents, periplasmic component.
 
 0.988
amb2744
ABC-type transport system involved in resistance to organic solvents, periplasmic component.
 
 0.987
amb0330
ABC-type transport system; Involved in resistance to organic solvents, periplasmic component.
  
 0.942
amb0434
ABC-type transport system; Involved in resistance to organic solvents, auxiliary component.
 
 
 0.922
amb0588
ABC-type transport system; Involved in resistance to organic solvents, ATPase component.
  
  
 
0.917
amb0331
ABC-type transport system; Involved in resistance to organic solvents, ATPase component.
  
  
 
0.911
amb0183
ABC-type multidrug transport system; Permease component.
      0.880
amb3404
ABC-type molybdate transport system, permease component; Part of the binding-protein-dependent transport system for molybdenum; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily.
 
 
    0.878
Your Current Organism:
Magnetospirillum magneticum
NCBI taxonomy Id: 342108
Other names: M. magneticum AMB-1, Magnetospirillum magneticum AMB-1, Magnetospirillum magneticum str. AMB-1, Magnetospirillum magneticum strain AMB-1, Magnetospirillum sp. (strain AMB-1), Magnetospirillum sp. AMB-1
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