Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
amb2156Hypothetical protein. (1208 aa)    
Predicted Functional Partners:
amb2775
NADH:ubiquinone oxidoreductase subunit 4; Chain M.
    
 
 0.820
amb2383
Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.
  
 
 0.805
amb2384
Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.
  
 
 0.805
amb2841
Predicted O-linked N-acetylglucosamine transferase; SPINDLY family.
 
 
 
 0.767
amb2610
Predicted O-linked N-acetylglucosamine transferase; SPINDLY family.
 
 
 
 0.756
amb3810
Predicted O-linked N-acetylglucosamine transferase; SPINDLY family.
 
 
 
 0.729
amb4019
Predicted methyltransferase; TPR repeat.
 
 
 
 0.699
amb2157
Indolepyruvate ferredoxin oxidoreductase with alpha and beta subunits.
       0.693
amb2158
Hypothetical protein.
       0.693
amb2901
Hypothetical protein.
 
  
 0.677
Your Current Organism:
Magnetospirillum magneticum
NCBI taxonomy Id: 342108
Other names: M. magneticum AMB-1, Magnetospirillum magneticum AMB-1, Magnetospirillum magneticum str. AMB-1, Magnetospirillum magneticum strain AMB-1, Magnetospirillum sp. (strain AMB-1), Magnetospirillum sp. AMB-1
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