STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
amb2157Indolepyruvate ferredoxin oxidoreductase with alpha and beta subunits. (897 aa)    
Predicted Functional Partners:
amb2158
Hypothetical protein.
     0.994
amb1990
Pyruvate-flavodoxin oxidoreductase.
  
 
 0.769
amb2156
Hypothetical protein.
       0.693
amb0170
FdhA-II protein; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
   
 
 0.651
amb2671
Anaerobic dehydrogenase; Typically selenocysteine-containing; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
   
 
 0.651
amb0169
NADH:ubiquinone oxidoreductase; NADH-binding (51 kD) subunit.
   
 
 0.591
amb3393
NAD-reducing hydrogenase diaphorase moiety largesubunit; hoxF homolog.
   
 
 0.591
amb0180
Ferredoxin oxidoreductase and related 2-oxoacid ferredoxin oxidoreductase; Gamma subunit.
 
 
0.578
amb3234
Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductase, gamma subunit.
 
 
0.578
amb2145
627aa long 2-oxoacid--ferredoxin oxidoreductasealpha subunit.
  
 
 0.557
Your Current Organism:
Magnetospirillum magneticum
NCBI taxonomy Id: 342108
Other names: M. magneticum AMB-1, Magnetospirillum magneticum AMB-1, Magnetospirillum magneticum str. AMB-1, Magnetospirillum magneticum strain AMB-1, Magnetospirillum sp. (strain AMB-1), Magnetospirillum sp. AMB-1
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