STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
amb2158Hypothetical protein. (249 aa)    
Predicted Functional Partners:
amb2157
Indolepyruvate ferredoxin oxidoreductase with alpha and beta subunits.
     0.994
amb0180
Ferredoxin oxidoreductase and related 2-oxoacid ferredoxin oxidoreductase; Gamma subunit.
 
 
 0.811
amb1990
Pyruvate-flavodoxin oxidoreductase.
  
 
 0.770
amb3234
Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductase, gamma subunit.
 
 
 0.713
amb2156
Hypothetical protein.
       0.693
amb2145
627aa long 2-oxoacid--ferredoxin oxidoreductasealpha subunit.
  
 
 0.607
amb1056
Succinate dehydrogenase/fumarate reductase; Flavoprotein subunit.
  
 
 0.540
amb3952
Succinate dehydrogenase/fumarate reductase, flavoprotein subunit; Belongs to the FAD-dependent oxidoreductase 2 family. FRD/SDH subfamily.
  
 
 0.540
amb2159
Nucleoside-diphosphate-sugar epimerase.
       0.492
amb0179
Indolepyruvate ferredoxin oxidoreductase; Alpha and beta subunits.
  
     0.467
Your Current Organism:
Magnetospirillum magneticum
NCBI taxonomy Id: 342108
Other names: M. magneticum AMB-1, Magnetospirillum magneticum AMB-1, Magnetospirillum magneticum str. AMB-1, Magnetospirillum magneticum strain AMB-1, Magnetospirillum sp. (strain AMB-1), Magnetospirillum sp. AMB-1
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