STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
amb2172Cytochrome subunit of sulfide dehydrogenase. (97 aa)    
Predicted Functional Partners:
amb2173
Uncharacterized NAD(FAD)-dependent dehydrogenase.
 
 
 0.998
amb1817
Uncharacterized NAD(FAD)-dependent dehydrogenase.
   
 0.980
amb0199
Cysteine synthase.
     
 0.909
amb1300
Cysteine synthase.
     
 0.909
amb2209
Sulfite reductase; Beta subunit (hemoprotein); Belongs to the nitrite and sulfite reductase 4Fe-4S domain family.
     
 0.901
amb3367
Sulfite reductase, dissimilatory-type alpha subunit.
     
 0.901
amb3368
Sulfite reductase, dissimilatory-type beta subunit.
     
 0.901
metZ
Cystathionine beta-lyase/cystathionine gamma-synthase; Catalyzes the formation of L-homocysteine from O-succinyl-L- homoserine (OSHS) and hydrogen sulfide.
     
  0.900
amb0855
Hypothetical protein.
 
   
 0.728
amb0856
Predicted secreted protein.
 
   
 0.689
Your Current Organism:
Magnetospirillum magneticum
NCBI taxonomy Id: 342108
Other names: M. magneticum AMB-1, Magnetospirillum magneticum AMB-1, Magnetospirillum magneticum str. AMB-1, Magnetospirillum magneticum strain AMB-1, Magnetospirillum sp. (strain AMB-1), Magnetospirillum sp. AMB-1
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