Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
amb2180Predicted transcriptional regulator. (201 aa)    
Predicted Functional Partners:
amb2261
Recombinational DNA repair protein; RecF pathway.
  
  
 0.729
amb0029
DNA polymerase III; Delta subunit.
  
     0.725
amb2682
Hypothetical protein.
  
     0.664
amb2680
Uncharacterized protein; Conserved in bacteria.
  
     0.655
amb3865
Hypothetical protein.
  
     0.652
amb3864
Hypothetical protein.
  
     0.639
amb3866
Hypothetical protein.
  
     0.615
amb4492
Kinesin-like protein K39.
  
     0.612
amb3839
Protein mraZ; Belongs to the MraZ family.
  
 
   0.602
amb3863
Uncharacterized conserved protein.
  
     0.556
Your Current Organism:
Magnetospirillum magneticum
NCBI taxonomy Id: 342108
Other names: M. magneticum AMB-1, Magnetospirillum magneticum AMB-1, Magnetospirillum magneticum str. AMB-1, Magnetospirillum magneticum strain AMB-1, Magnetospirillum sp. (strain AMB-1), Magnetospirillum sp. AMB-1
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