Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
amb2227Heme/copper-type cytochrome/quinol oxidase; Subunit 1. (348 aa)    
Predicted Functional Partners:
amb2229
Heme/copper-type cytochrome/quinol oxidase; Subunit 2.
  
 0.995
amb2170
Heme/copper-type cytochrome/quinol oxidase; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B).
  
 0.991
amb2167
Heme/copper-type cytochrome/quinol oxidase; Subunit 3.
  
 0.989
amb2221
Heme/copper-type cytochrome/quinol oxidase, subunit 2.
  
 0.989
amb4089
Cytochrome b/c1; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis.
  
 
 0.986
amb2225
Cytochrome b subunit of the bc complex.
  
 
 0.970
amb2228
Hypothetical protein.
      0.970
amb4365
Cytochrome c, mono- and diheme variants; C-type cytochrome. Part of the cbb3-type cytochrome c oxidase complex.
  
 0.949
amb2222
Heme/copper-type cytochrome/quinol oxidase, subunit 1.
    
 
0.942
amb4363
Cbb3-type cytochrome oxidase, cytochrome c subunit.
   
 0.940
Your Current Organism:
Magnetospirillum magneticum
NCBI taxonomy Id: 342108
Other names: M. magneticum AMB-1, Magnetospirillum magneticum AMB-1, Magnetospirillum magneticum str. AMB-1, Magnetospirillum magneticum strain AMB-1, Magnetospirillum sp. (strain AMB-1), Magnetospirillum sp. AMB-1
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