STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
amb2230Beta-glucosidase/6-phospho-beta-glucosidase/ beta- galactosidase; Belongs to the glycosyl hydrolase 1 family. (392 aa)    
Predicted Functional Partners:
amb0219
Beta-glucosidase A.
  
  
 
0.908
amb2735
Alpha-galactosidase/6-phospho-beta-glucosidase; Family 4 of glycosyl hydrolase.
 
  
 0.618
amb2338
Ribose 5-phosphate isomerase RpiB.
  
  
 0.538
glk
Glucokinase; Belongs to the bacterial glucokinase family.
      0.450
amb2225
Cytochrome b subunit of the bc complex.
     
 0.435
amb1778
Uncharacterized conserved protein.
   
   0.422
amb2229
Heme/copper-type cytochrome/quinol oxidase; Subunit 2.
     
 0.422
amb2227
Heme/copper-type cytochrome/quinol oxidase; Subunit 1.
     
 0.403
amb2228
Hypothetical protein.
     
 0.403
Your Current Organism:
Magnetospirillum magneticum
NCBI taxonomy Id: 342108
Other names: M. magneticum AMB-1, Magnetospirillum magneticum AMB-1, Magnetospirillum magneticum str. AMB-1, Magnetospirillum magneticum strain AMB-1, Magnetospirillum sp. (strain AMB-1), Magnetospirillum sp. AMB-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.