STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
amb2285Predicted Zn-dependent hydrolase of the beta-lactamase fold. (283 aa)    
Predicted Functional Partners:
amb1949
Phenolpthiocerol synthesis polyketide synthase ppsA.
  
  
 0.570
amb2284
Response regulator containing CheY-like receiver; AAA-type ATPase, and DNA-binding domains.
       0.564
amb2884
Lyzozyme M1; 1,4-beta-N-acetylmuramidase.
 
     0.513
amb4480
Hypothetical protein.
  
     0.503
amb2286
Methyl-accepting chemotaxis protein.
       0.471
amb2270
Histone acetyltransferase HPA2 and related acetyltransferase.
 
 
   0.465
amb1418
Predicted membrane protein.
  
     0.446
amb0624
Predicted hydrolase or acyltransferase; Alpha/beta hydrolase superfamily.
  
   
 0.439
amb4181
Hypothetical protein.
  
    0.436
amb2831
Hypothetical protein.
 
     0.434
Your Current Organism:
Magnetospirillum magneticum
NCBI taxonomy Id: 342108
Other names: M. magneticum AMB-1, Magnetospirillum magneticum AMB-1, Magnetospirillum magneticum str. AMB-1, Magnetospirillum magneticum strain AMB-1, Magnetospirillum sp. (strain AMB-1), Magnetospirillum sp. AMB-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.