STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ubiX3-polyprenyl-4-hydroxybenzoate decarboxylase; Flavin prenyltransferase that catalyzes the synthesis of the prenylated FMN cofactor (prenyl-FMN) for 4-hydroxy-3-polyprenylbenzoic acid decarboxylase UbiD. The prenyltransferase is metal-independent and links a dimethylallyl moiety from dimethylallyl monophosphate (DMAP) to the flavin N5 and C6 atoms of FMN; Belongs to the UbiX/PAD1 family. (191 aa)    
Predicted Functional Partners:
amb0234
3-polyprenyl-4-hydroxybenzoate decarboxylase and related decarboxylase; Belongs to the UbiD family.
 
 0.995
amb0771
4-hydroxybenzoate polyprenyltransferase and related prenyltransferase; Catalyzes the prenylation of para-hydroxybenzoate (PHB) with an all-trans polyprenyl group. Mediates the second step in the final reaction sequence of ubiquinone-8 (UQ-8) biosynthesis, which is the condensation of the polyisoprenoid side chain with PHB, generating the first membrane-bound Q intermediate 3-octaprenyl-4-hydroxybenzoate.
 
  
 0.974
amb0490
Collagenase and related protease.
 
 
  0.928
amb0492
Putative lipid carrier protein.
 
  
  0.928
amb0491
Putative protease yhbU precursor.
  
 
  0.921
amb1551
Acyl-coenzyme A synthetase/AMP-(fatty) acid ligase.
    
 0.906
amb2869
Acyl-coenzyme A synthetase/AMP-(fatty) acid ligase.
    
 0.906
amb1227
Nitroreductase.
     
  0.900
amb1307
NTP pyrophosphohydrolase; Including oxidative damage repair enzyme.
   
 
  0.900
amb1530
NTP pyrophosphohydrolase including oxidative damage repair enzyme.
     
  0.900
Your Current Organism:
Magnetospirillum magneticum
NCBI taxonomy Id: 342108
Other names: M. magneticum AMB-1, Magnetospirillum magneticum AMB-1, Magnetospirillum magneticum str. AMB-1, Magnetospirillum magneticum strain AMB-1, Magnetospirillum sp. (strain AMB-1), Magnetospirillum sp. AMB-1
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