Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
amb2311ABC-type Mn2+/Zn2+ transport systems, permease components. (260 aa)    
Predicted Functional Partners:
znuC
ABC-type Mn/Zn transport systems, ATPase component; Part of the ABC transporter complex ZnuABC involved in zinc import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Zinc importer (TC 3.A.1.15.5) family.
 0.999
amb2308
ABC-type Zn2+ transport system, periplasmic component/surface adhesin.
 
 
 0.995
amb2309
Fe2+/Zn2+ uptake regulation protein; Belongs to the Fur family.
 
  
 0.933
hisI
Phosphoribosyl-AMP cyclohydrolase; Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP.
     
 0.540
amb2306
Putative GTPase; G3E family.
  
  
 0.525
amb4389
ABC-type oligopeptide transport system, periplasmic component.
 
  
 0.521
amb2312
Hypothetical protein.
       0.517
rpmE
Ribosomal protein L31; Binds the 23S rRNA; Belongs to the bacterial ribosomal protein bL31 family. Type A subfamily.
   
  
 0.459
amb3936
ABC-type (unclassified) transport system, ATPase component.
     
 0.459
potA
ABC-type spermidine/putrescine transport systems; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system.
     
 0.442
Your Current Organism:
Magnetospirillum magneticum
NCBI taxonomy Id: 342108
Other names: M. magneticum AMB-1, Magnetospirillum magneticum AMB-1, Magnetospirillum magneticum str. AMB-1, Magnetospirillum magneticum strain AMB-1, Magnetospirillum sp. (strain AMB-1), Magnetospirillum sp. AMB-1
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