STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
amb2311ABC-type Mn2+/Zn2+ transport systems, permease components. (260 aa)    
Predicted Functional Partners:
znuC
ABC-type Mn/Zn transport systems, ATPase component; Part of the ABC transporter complex ZnuABC involved in zinc import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Zinc importer (TC 3.A.1.15.5) family.
 0.999
amb2308
ABC-type Zn2+ transport system, periplasmic component/surface adhesin.
 
 
 0.994
amb2309
Fe2+/Zn2+ uptake regulation protein; Belongs to the Fur family.
 
  
 0.937
hisI
Phosphoribosyl-AMP cyclohydrolase; Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP.
       0.534
amb2306
Putative GTPase; G3E family.
  
  
 0.524
amb2312
Hypothetical protein.
       0.517
amb3878
Sensor protein gacS.
     
 0.495
rpmE
Ribosomal protein L31; Binds the 23S rRNA; Belongs to the bacterial ribosomal protein bL31 family. Type A subfamily.
   
  
 0.464
amb4389
ABC-type oligopeptide transport system, periplasmic component.
 
 
 0.461
amb3936
ABC-type (unclassified) transport system, ATPase component.
 
   
 0.455
Your Current Organism:
Magnetospirillum magneticum
NCBI taxonomy Id: 342108
Other names: M. magneticum AMB-1, Magnetospirillum magneticum AMB-1, Magnetospirillum magneticum str. AMB-1, Magnetospirillum magneticum strain AMB-1, Magnetospirillum sp. (strain AMB-1), Magnetospirillum sp. AMB-1
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