Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
amb2325ABC-type branched-chain amino acid transport system, permease component; Belongs to the binding-protein-dependent transport system permease family. (316 aa)    
Predicted Functional Partners:
amb2326
Branched-chain amino acid ABC-type transport system, permease components; Belongs to the binding-protein-dependent transport system permease family.
 
 0.999
amb2328
ABC-type branched-chain amino acid transport systems, ATPase component.
  
 0.994
amb2329
ABC-type branched-chain amino acid transport systems, ATPase component.
  
 0.994
amb2873
Branched-chain amino acid ABC-type transport system; Permease components; Belongs to the binding-protein-dependent transport system permease family.
  
 0.984
amb2871
ABC-type branched-chain amino acid transport systems, ATPase component.
  
 0.982
amb2870
ABC-type branched-chain amino acid transport systems, ATPase component.
  
 0.968
amb2460
Branched-chain amino acid ABC-type transport system, permease components; Belongs to the binding-protein-dependent transport system permease family.
  
 0.966
amb1475
ABC-type branched-chain amino acid transport systems; ATPase component.
  
 0.963
amb1802
ABC-type branched-chain amino acid transport systems, ATPase component.
  
 0.958
amb1476
ABC-type branched-chain amino acid transport systems; ATPase component.
  
 0.954
Your Current Organism:
Magnetospirillum magneticum
NCBI taxonomy Id: 342108
Other names: M. magneticum AMB-1, Magnetospirillum magneticum AMB-1, Magnetospirillum magneticum str. AMB-1, Magnetospirillum magneticum strain AMB-1, Magnetospirillum sp. (strain AMB-1), Magnetospirillum sp. AMB-1
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