STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
amb2330Glutamate synthase domain 1. (482 aa)    
Predicted Functional Partners:
amb2332
NADPH-dependent glutamate synthase beta chain and related oxidoreductase.
 
 0.998
amb2331
Glutamate synthase domain 2.
     0.994
amb0522
NADPH-dependent glutamate synthase beta chain and related oxidoreductase.
 
 0.987
amb3375
NADPH-dependent glutamate synthase beta chain and related oxidoreductase.
 
 0.982
amb0521
Glutamate synthase [NADPH] large chain precursor.
  
 
 0.940
amb3454
2,4-dienoyl-CoA reductase.
  
 
 0.779
amb0285
Hypothetical protein RP006.
  
 
 0.775
guaA
GMP synthase; Catalyzes the synthesis of GMP from XMP.
  
  
 0.597
amb0176
Ferredoxin-NADP reductase; Root-type isozyme, chloroplast precursor.
  
  
 0.474
cysC
NodQ bifunctional enzyme; Catalyzes the synthesis of activated sulfate.
     
 0.461
Your Current Organism:
Magnetospirillum magneticum
NCBI taxonomy Id: 342108
Other names: M. magneticum AMB-1, Magnetospirillum magneticum AMB-1, Magnetospirillum magneticum str. AMB-1, Magnetospirillum magneticum strain AMB-1, Magnetospirillum sp. (strain AMB-1), Magnetospirillum sp. AMB-1
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