Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
Experiments
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[Homology]
Score
amb2334Uncharacterized protein involved in response to NO. (403 aa)    
Predicted Functional Partners:
amb2944
Nitric oxide reductase large subunit; Belongs to the heme-copper respiratory oxidase family.
 
  
 0.810
amb4373
Predicted membrane protein.
 
     0.769
amb2335
Uncharacterized conserved protein.
       0.705
amb2945
Cytochrome c, mono- and diheme variants.
 
  
 0.700
amb2942
Nitric oxide reductase activation protein.
 
  
 0.693
amb0490
Collagenase and related protease.
 
    0.596
amb2333
Methyl-accepting chemotaxis protein; Chemotactic-signal transducers respond to changes in the concentration of attractants and repellents in the environment, transduce a signal from the outside to the inside of the cell, and facilitate sensory adaptation through variation of methylation levels. Attractants increase the level of methylation while repellents decrease the level of methylation.
       0.556
amb0491
Putative protease yhbU precursor.
 
    0.554
amb2336
Metal-dependent hydrolase of the beta-lactamase superfamily I.
       0.478
amb2946
CRP/FNR family transcriptional regulator, dissimilatory nitrate respiration regulator; cAMP-binding protein - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinase.
 
   
 0.465
Your Current Organism:
Magnetospirillum magneticum
NCBI taxonomy Id: 342108
Other names: M. magneticum AMB-1, Magnetospirillum magneticum AMB-1, Magnetospirillum magneticum str. AMB-1, Magnetospirillum magneticum strain AMB-1, Magnetospirillum sp. (strain AMB-1), Magnetospirillum sp. AMB-1
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