STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
amb2336Metal-dependent hydrolase of the beta-lactamase superfamily I. (274 aa)    
Predicted Functional Partners:
amb2235
Adenylate cyclase; Family 3.
 
     0.712
amb3618
Adenylate cyclase 1.
 
     0.708
amb4060
Adenylate cyclase; Family 3.
 
     0.683
amb1226
Adenylate cyclase 1.
 
     0.681
amb3040
Ferredoxin.
 
     0.659
amb2335
Uncharacterized conserved protein.
       0.613
amb0233
HD-GYP domain.
 
     0.518
amb2334
Uncharacterized protein involved in response to NO.
       0.478
amb4259
CRP/FNR family transcriptional regulator, cyclic AMP receptor protein; cAMP-binding protein - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinase.
  
     0.453
amb3039
Hypothetical protein.
 
     0.451
Your Current Organism:
Magnetospirillum magneticum
NCBI taxonomy Id: 342108
Other names: M. magneticum AMB-1, Magnetospirillum magneticum AMB-1, Magnetospirillum magneticum str. AMB-1, Magnetospirillum magneticum strain AMB-1, Magnetospirillum sp. (strain AMB-1), Magnetospirillum sp. AMB-1
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