STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
amb2463Predicted dithiol-disulfide isomerase involved in polyketide biosynthesis. (215 aa)    
Predicted Functional Partners:
amb1577
Hypothetical 157 kDa protein in draG 3'region; Belongs to the ArsC family.
   
 
 0.743
amb1831
Arsenate reductase and related protein; Glutaredoxin family.
   
 
 0.743
amb2462
Response regulator containing a CheY-like receiver domain and a GGDEF domain.
       0.735
amb2461
ABC-type branched-chain amino acid transport systems, periplasmic component.
   
   0.572
amb1533
Disulfide bond formation protein DsbB.
  
  
 0.479
amb2457
ABC-type branched-chain amino acid transport systems, ATPase component.
       0.431
amb2458
ABC-type branched-chain amino acid transport systems, ATPase component.
       0.431
amb2459
ABC-type branched-chain amino acid transport system, permease component; Belongs to the binding-protein-dependent transport system permease family.
       0.431
amb2460
Branched-chain amino acid ABC-type transport system, permease components; Belongs to the binding-protein-dependent transport system permease family.
       0.431
amb2621
Kef-type K+ transport systems; Membrane components.
 
   
 0.416
Your Current Organism:
Magnetospirillum magneticum
NCBI taxonomy Id: 342108
Other names: M. magneticum AMB-1, Magnetospirillum magneticum AMB-1, Magnetospirillum magneticum str. AMB-1, Magnetospirillum magneticum strain AMB-1, Magnetospirillum sp. (strain AMB-1), Magnetospirillum sp. AMB-1
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