Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-occurrence
Co-expression
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[Homology]
Score
amb2504Predicted O-linked N-acetylglucosamine transferase; SPINDLY family. (658 aa)    
Predicted Functional Partners:
amb0687
Predicted O-linked N-acetylglucosamine transferase; SPINDLY family.
  
     0.774
amb2653
Uncharacterized protein; Conserved in bacteria.
   
 0.670
amb0795
2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1, 4-benzoquinol methylase.
      0.661
amb3060
FOG: TPR repeat.
 
 
 0.645
amb4019
Predicted methyltransferase; TPR repeat.
 
 
   0.629
amb2156
Hypothetical protein.
 
 
 
 0.578
amb0435
Ice nucleation protein.
  
     0.572
amb0024
TPR repeat protein.
     0.571
amb3871
FOG: TPR repeat.
     0.567
amb2136
TPR repeat.
 
  
0.558
Your Current Organism:
Magnetospirillum magneticum
NCBI taxonomy Id: 342108
Other names: M. magneticum AMB-1, Magnetospirillum magneticum AMB-1, Magnetospirillum magneticum str. AMB-1, Magnetospirillum magneticum strain AMB-1, Magnetospirillum sp. (strain AMB-1), Magnetospirillum sp. AMB-1
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