STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
amb2559Flagellar motor protein. (220 aa)    
Predicted Functional Partners:
amb2558
Flagellar motor component.
 
 0.998
amb1698
Flagellar motor component.
  
 0.970
amb2578
Flagellar motor component.
  
 0.970
amb1289
Flagellar motor protein.
  
  
 
0.925
amb3827
Flagellar hook-associated protein; Belongs to the flagella basal body rod proteins family.
 
  
 0.924
amb2579
Flagellar motor protein.
     
0.906
amb0615
Flagellar basal body rod protein; Belongs to the flagella basal body rod proteins family.
 
  
 0.904
amb0504
Flagellar hook protein FlgE.
 
  
 0.883
amb3165
Flagellar motor component.
  
 
 0.883
amb3329
Hypothetical 1041 kDa protein in hypE 3'region.
  
  
 0.878
Your Current Organism:
Magnetospirillum magneticum
NCBI taxonomy Id: 342108
Other names: M. magneticum AMB-1, Magnetospirillum magneticum AMB-1, Magnetospirillum magneticum str. AMB-1, Magnetospirillum magneticum strain AMB-1, Magnetospirillum sp. (strain AMB-1), Magnetospirillum sp. AMB-1
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