STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
lolDABC-type antimicrobial peptide transport system, ATPase component; Part of the ABC transporter complex LolCDE involved in the translocation of mature outer membrane-directed lipoproteins, from the inner membrane to the periplasmic chaperone, LolA. Responsible for the formation of the LolA-lipoprotein complex in an ATP-dependent manner. (226 aa)    
Predicted Functional Partners:
amb2572
ABC-type transport system, permease component; Involved in lipoprotein release.
 0.994
amb2765
ABC-type transport system; Involved in lipoprotein release, permease component.
 
 0.968
amb2766
ABC-type antimicrobial peptide transport system; ATPase component.
  
  
 
0.910
amb2541
ABC-type antimicrobial peptide transport system, permease component.
  
 
 0.815
amb0534
ABC-type nitrate/sulfonate/bicarbonate transport systems; Periplasmic component.
 
    
 0.790
amb0537
ABC-type nitrate/sulfonate/bicarbonate transport systems; Periplasmic component.
 
    
 0.777
amb2570
Uncharacterized relative of glutathione S-transferase; MAPEG superfamily.
       0.773
amb2917
ABC-type transport system, involved in lipoprotein release, permease component.
  
 
 0.704
rpsE
Ribosomal protein S5; With S4 and S12 plays an important role in translational accuracy; Belongs to the universal ribosomal protein uS5 family.
  
   
 0.673
amb1036
ATP-dependent Zn protease.
 
   
 0.646
Your Current Organism:
Magnetospirillum magneticum
NCBI taxonomy Id: 342108
Other names: M. magneticum AMB-1, Magnetospirillum magneticum AMB-1, Magnetospirillum magneticum str. AMB-1, Magnetospirillum magneticum strain AMB-1, Magnetospirillum sp. (strain AMB-1), Magnetospirillum sp. AMB-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.