Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
amb2578Flagellar motor component. (286 aa)    
Predicted Functional Partners:
amb2579
Flagellar motor protein.
 0.999
amb2559
Flagellar motor protein.
  
 0.975
amb0503
Flagellar biosynthesis/type III secretory pathway lipoprotein; The M ring may be actively involved in energy transduction. Belongs to the FliF family.
 
  
 0.962
amb0615
Flagellar basal body rod protein; Belongs to the flagella basal body rod proteins family.
 
  
 0.957
flgH
Flagellar basal body L-ring protein; Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation.
 
  
 0.954
fliP
Flagellar biosynthesis pathway; Plays a role in the flagellum-specific transport system. Belongs to the FliP/MopC/SpaP family.
 
  
 0.926
amb0505
Flagellar hook capping protein; Required for flagellar hook formation. May act as a scaffolding protein.
 
  
 0.925
fliQ
Flagellar biosynthesis pathway; Role in flagellar biosynthesis. Belongs to the FliQ/MopD/SpaQ family.
 
  
 0.923
amb3827
Flagellar hook-associated protein; Belongs to the flagella basal body rod proteins family.
 
  
 0.923
amb3329
Hypothetical 1041 kDa protein in hypE 3'region.
  
  
 0.913
Your Current Organism:
Magnetospirillum magneticum
NCBI taxonomy Id: 342108
Other names: M. magneticum AMB-1, Magnetospirillum magneticum AMB-1, Magnetospirillum magneticum str. AMB-1, Magnetospirillum magneticum strain AMB-1, Magnetospirillum sp. (strain AMB-1), Magnetospirillum sp. AMB-1
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