STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
amb2622ABC-type spermidine/putrescine transport system; Permease component II. (268 aa)    
Predicted Functional Partners:
amb2623
ABC-type spermidine/putrescine transport system; Permease component I.
 
0.999
potA
ABC-type spermidine/putrescine transport systems; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system.
 
 0.999
amb2625
Spermidine/putrescine-binding periplasmic protein; Required for the activity of the bacterial periplasmic transport system of putrescine; Belongs to the bacterial solute-binding protein PotD/PotF family.
 
 0.999
amb0565
Spermidine/putrescine-binding periplasmic protein.
  
 0.995
amb2621
Kef-type K+ transport systems; Membrane components.
     
 0.793
amb2012
ABC-type sulfate/molybdate transport systems; ATPase component.
    0.621
amb0278
ABC-type cobalt transport system; Part of an ABC transporter complex. Responsible for energy coupling to the transport system.
   
    0.443
amb4338
ABC-type cobalt transport system, ATPase component.
   
    0.443
amb2626
Predicted symporter; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.
       0.435
amb2627
Predicted membrane protein.
       0.435
Your Current Organism:
Magnetospirillum magneticum
NCBI taxonomy Id: 342108
Other names: M. magneticum AMB-1, Magnetospirillum magneticum AMB-1, Magnetospirillum magneticum str. AMB-1, Magnetospirillum magneticum strain AMB-1, Magnetospirillum sp. (strain AMB-1), Magnetospirillum sp. AMB-1
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.