STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
potAABC-type spermidine/putrescine transport systems; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system. (379 aa)    
Predicted Functional Partners:
amb2622
ABC-type spermidine/putrescine transport system; Permease component II.
 
 0.999
amb2623
ABC-type spermidine/putrescine transport system; Permease component I.
 0.999
amb2625
Spermidine/putrescine-binding periplasmic protein; Required for the activity of the bacterial periplasmic transport system of putrescine; Belongs to the bacterial solute-binding protein PotD/PotF family.
 
 0.998
amb0565
Spermidine/putrescine-binding periplasmic protein.
  
 0.956
amb0183
ABC-type multidrug transport system; Permease component.
 
 
 
  0.931
amb3404
ABC-type molybdate transport system, permease component; Part of the binding-protein-dependent transport system for molybdenum; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily.
 
  
 0.876
amb2621
Kef-type K+ transport systems; Membrane components.
       0.773
amb0534
ABC-type nitrate/sulfonate/bicarbonate transport systems; Periplasmic component.
      0.618
amb0774
ABC-type Na+ transport system; ATPase component.
 
    
0.616
amb0537
ABC-type nitrate/sulfonate/bicarbonate transport systems; Periplasmic component.
      0.609
Your Current Organism:
Magnetospirillum magneticum
NCBI taxonomy Id: 342108
Other names: M. magneticum AMB-1, Magnetospirillum magneticum AMB-1, Magnetospirillum magneticum str. AMB-1, Magnetospirillum magneticum strain AMB-1, Magnetospirillum sp. (strain AMB-1), Magnetospirillum sp. AMB-1
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