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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
amb2630Cytochrome c553. (210 aa)    
Predicted Functional Partners:
amb4089
Cytochrome b/c1; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis.
 
  
 0.798
amb4363
Cbb3-type cytochrome oxidase, cytochrome c subunit.
 
 
 0.707
amb2173
Uncharacterized NAD(FAD)-dependent dehydrogenase.
 
 
 
 0.644
amb3575
Hypothetical protein.
  
 
 0.581
amb1817
Uncharacterized NAD(FAD)-dependent dehydrogenase.
   
 
 0.578
rnfH
Uncharacterized protein conserved in bacteria; Belongs to the UPF0125 (RnfH) family.
  
     0.548
amb2631
Acyl-CoA synthetase/AMP-acid ligase II.
       0.536
amb2632
Electron transfer flavoprotein; Beta subunit.
       0.536
amb4088
Ubiquinol-cytochrome C reductase iron-sulfur subunit; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis.
 
  
 0.535
amb3089
Uncharacterized protein conserved in bacteria.
 
 
   0.513
Your Current Organism:
Magnetospirillum magneticum
NCBI taxonomy Id: 342108
Other names: M. magneticum AMB-1, Magnetospirillum magneticum AMB-1, Magnetospirillum magneticum str. AMB-1, Magnetospirillum magneticum strain AMB-1, Magnetospirillum sp. (strain AMB-1), Magnetospirillum sp. AMB-1
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