STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
amb2633Electron transfer flavoprotein; Alpha subunit. (311 aa)    
Predicted Functional Partners:
amb4437
Dehydrogenase; Accepts electrons from ETF and reduces ubiquinone.
 
 0.995
amb2632
Electron transfer flavoprotein; Beta subunit.
 0.990
amb3230
Electron transfer flavoprotein; Beta subunit.
 0.984
amb3904
Electron transfer flavoprotein, beta subunit.
 0.984
amb2634
Acyl-CoA dehydrogenase.
 
 0.947
amb0677
Acyl-CoA dehydrogenase.
 
 0.932
amb3599
Acyl-CoA dehydrogenase.
 
 0.885
amb3586
Acyl-CoA dehydrogenase.
 
 0.859
amb2599
Acyl-CoA dehydrogenase.
 
 0.844
rplC
Ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit.
 
 
    0.842
Your Current Organism:
Magnetospirillum magneticum
NCBI taxonomy Id: 342108
Other names: M. magneticum AMB-1, Magnetospirillum magneticum AMB-1, Magnetospirillum magneticum str. AMB-1, Magnetospirillum magneticum strain AMB-1, Magnetospirillum sp. (strain AMB-1), Magnetospirillum sp. AMB-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.