STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
amb2639Signal transduction histidine kinase. (638 aa)    
Predicted Functional Partners:
amb1110
Signal transduction histidine kinase.
 
 
0.964
amb3195
Signal transduction histidine kinase.
 
 
0.949
amb2293
Signal transduction histidine kinase.
 
 
0.946
amb1956
Signal transduction histidine kinase.
 
 
0.942
amb2932
Methylase of chemotaxis methyl-accepting protein.
 
 
 0.938
amb2205
Signal transduction histidine kinase.
 
 
0.936
amb1841
Hypothetical protein.
 
 
0.934
amb3438
Sensor protein gacS.
 
 
0.934
amb4146
Signal transduction histidine kinase.
 
 
0.934
amb3654
Hypothetical 1041 kDa protein in hypE 3'region.
 
 
 0.932
Your Current Organism:
Magnetospirillum magneticum
NCBI taxonomy Id: 342108
Other names: M. magneticum AMB-1, Magnetospirillum magneticum AMB-1, Magnetospirillum magneticum str. AMB-1, Magnetospirillum magneticum strain AMB-1, Magnetospirillum sp. (strain AMB-1), Magnetospirillum sp. AMB-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.