STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
amb2645Predicted transmembrane transcriptional regulator. (256 aa)    
Predicted Functional Partners:
amb2646
DNA-directed RNA polymerase specialized sigma subunit; Sigma24 homolog.
 
 
 0.979
amb2647
Uncharacterized protein; Conserved in bacteria.
 
     0.867
amb1597
DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog; Belongs to the sigma-70 factor family.
 
 
 0.814
amb1490
Hypothetical protein; Belongs to the sigma-70 factor family. ECF subfamily.
  
 
 0.730
amb1834
DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog; Belongs to the sigma-70 factor family. ECF subfamily.
  
 
 0.730
amb2816
DNA-directed RNA polymerase specialized sigma subunit; Sigma24 homolog; Belongs to the sigma-70 factor family. ECF subfamily.
  
 
 0.730
amb3478
DNA-directed RNA polymerase specialized sigma subunit; Sigma24 homolog; Belongs to the sigma-70 factor family.
  
 
 0.730
amb0350
Hypothetical protein.
  
 
 0.647
amb0368
Hypothetical protein.
  
 
 0.647
amb1166
Hypothetical protein.
  
 
 0.647
Your Current Organism:
Magnetospirillum magneticum
NCBI taxonomy Id: 342108
Other names: M. magneticum AMB-1, Magnetospirillum magneticum AMB-1, Magnetospirillum magneticum str. AMB-1, Magnetospirillum magneticum strain AMB-1, Magnetospirillum sp. (strain AMB-1), Magnetospirillum sp. AMB-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.