Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
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gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
amb2659Serine phosphatase RsbU; Regulator of sigma subunit. (390 aa)    
Predicted Functional Partners:
amb1110
Signal transduction histidine kinase.
 
  
 0.925
amb2293
Signal transduction histidine kinase.
 
  
 0.861
amb1968
Signal transduction histidine kinase.
 
    0.786
amb0650
Predicted periplasmic ligand-binding sensor domain.
 
  
 0.783
amb3048
Signal transduction histidine kinase.
  
 0.744
amb1432
Signal transduction histidine kinase.
 
  
0.742
amb0567
Signal transduction histidine kinase.
 
  
 0.729
amb1281
Predicted signal transduction protein containing a membrane domain; EAL and a GGDEF domain.
  
  
 0.717
amb3096
Signal transduction histidine kinase.
 
  
 0.717
amb3447
Signal transduction histidine kinase.
  
   
 0.717
Your Current Organism:
Magnetospirillum magneticum
NCBI taxonomy Id: 342108
Other names: M. magneticum AMB-1, Magnetospirillum magneticum AMB-1, Magnetospirillum magneticum str. AMB-1, Magnetospirillum magneticum strain AMB-1, Magnetospirillum sp. (strain AMB-1), Magnetospirillum sp. AMB-1
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