STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
amb2669Uncharacterized component of anaerobic dehydrogenase. (201 aa)    
Predicted Functional Partners:
amb2674
Cytochrome b subunit of formate dehydrogenase.
 
  
 0.950
amb2671
Anaerobic dehydrogenase; Typically selenocysteine-containing; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
 
   
 0.945
amb2672
Fe-S-cluster-containing hydrogenase components 1.
 
  
 0.938
amb2665
Ferredoxin.
 
  
 0.914
amb2668
Hypothetical protein.
 
     0.880
fdhD-2
Uncharacterized protein required; Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH. Belongs to the FdhD family.
 
   
 0.843
amb2670
Hypothetical protein.
     
 0.810
amb2673
Hypothetical protein.
       0.689
amb3046
ABC-type tungstate transport system, periplasmic component.
 
    0.683
amb3044
ABC-type tungstate transport system, permease component.
 
     0.601
Your Current Organism:
Magnetospirillum magneticum
NCBI taxonomy Id: 342108
Other names: M. magneticum AMB-1, Magnetospirillum magneticum AMB-1, Magnetospirillum magneticum str. AMB-1, Magnetospirillum magneticum strain AMB-1, Magnetospirillum sp. (strain AMB-1), Magnetospirillum sp. AMB-1
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