STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
amb2671Anaerobic dehydrogenase; Typically selenocysteine-containing; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. (961 aa)    
Predicted Functional Partners:
amb2672
Fe-S-cluster-containing hydrogenase components 1.
 
 
 0.997
amb2674
Cytochrome b subunit of formate dehydrogenase.
 
 
 0.997
amb0169
NADH:ubiquinone oxidoreductase; NADH-binding (51 kD) subunit.
 
 0.994
amb2665
Ferredoxin.
 
 
 0.985
amb0207
Ni,Fe-hydrogenase III large subunit.
  
 
 0.959
amb2669
Uncharacterized component of anaerobic dehydrogenase.
 
   
 0.945
amb2921
Fe-S-cluster-containing hydrogenase components 2.
  
 
 0.942
amb3393
NAD-reducing hydrogenase diaphorase moiety largesubunit; hoxF homolog.
  
 
 0.941
amb0170
FdhA-II protein; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
 
  
 
0.926
purU
Formyltetrahydrofolate hydrolase; Catalyzes the hydrolysis of 10-formyltetrahydrofolate (formyl-FH4) to formate and tetrahydrofolate (FH4).
     
  0.900
Your Current Organism:
Magnetospirillum magneticum
NCBI taxonomy Id: 342108
Other names: M. magneticum AMB-1, Magnetospirillum magneticum AMB-1, Magnetospirillum magneticum str. AMB-1, Magnetospirillum magneticum strain AMB-1, Magnetospirillum sp. (strain AMB-1), Magnetospirillum sp. AMB-1
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