Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
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[Homology]
Score
amb2741Uncharacterized protein; Conserved in bacteria. (167 aa)    
Predicted Functional Partners:
amb2745
NADH:ubiquinone oxidoreductase 172 kD subunit.
 
   
 0.946
amb2743
ABC-type transport system involved in resistance to organic solvents, periplasmic component.
       0.787
amb2744
ABC-type transport system involved in resistance to organic solvents, periplasmic component.
       0.776
amb2742
Permease of the drug/metabolite transporter superfamily.
       0.773
amb2682
Hypothetical protein.
  
     0.702
amb4423
Uncharacterized enzyme of heme biosynthesis.
  
     0.685
amb2746
Ribonucleotide reductase; Catalyzes the reduction of ribonucleotides to deoxyribonucleotides. May function to provide a pool of deoxyribonucleotide precursors for DNA repair during oxygen limitation and/or for immediate growth after restoration of oxygen.
 
     0.666
amb0959
Uncharacterized membrane-bound protein.
  
     0.661
amb0601
Hypothetical protein.
  
     0.649
amb2261
Recombinational DNA repair protein; RecF pathway.
  
     0.643
Your Current Organism:
Magnetospirillum magneticum
NCBI taxonomy Id: 342108
Other names: M. magneticum AMB-1, Magnetospirillum magneticum AMB-1, Magnetospirillum magneticum str. AMB-1, Magnetospirillum magneticum strain AMB-1, Magnetospirillum sp. (strain AMB-1), Magnetospirillum sp. AMB-1
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