STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
amb2745NADH:ubiquinone oxidoreductase 172 kD subunit. (140 aa)    
Predicted Functional Partners:
amb2741
Uncharacterized protein; Conserved in bacteria.
 
     0.942
amb2744
ABC-type transport system involved in resistance to organic solvents, periplasmic component.
     
 0.818
amb2743
ABC-type transport system involved in resistance to organic solvents, periplasmic component.
     
 0.809
amb2742
Permease of the drug/metabolite transporter superfamily.
       0.756
amb3426
Cytochrome C2, iso-2.
  
     0.662
amb1330
Uncharacterized protein; Conserved in bacteria.
 
   
 0.661
amb1259
Cytochrome C2; Iso-2.
  
     0.632
amb2781
NADH dehydrogenase/NADH:ubiquinone oxidoreductase 75 kD subunit; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. Belongs to the complex I 75 kDa subunit family.
  
     0.600
amb2746
Ribonucleotide reductase; Catalyzes the reduction of ribonucleotides to deoxyribonucleotides. May function to provide a pool of deoxyribonucleotide precursors for DNA repair during oxygen limitation and/or for immediate growth after restoration of oxygen.
       0.578
amb4543
Uncharacterized protein; Conserved in bacteria.
  
     0.562
Your Current Organism:
Magnetospirillum magneticum
NCBI taxonomy Id: 342108
Other names: M. magneticum AMB-1, Magnetospirillum magneticum AMB-1, Magnetospirillum magneticum str. AMB-1, Magnetospirillum magneticum strain AMB-1, Magnetospirillum sp. (strain AMB-1), Magnetospirillum sp. AMB-1
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