STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
amb2755Coenzyme F390 synthetase; Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA). (442 aa)    
Predicted Functional Partners:
amb2753
Uncharacterized protein; Possibly involved in aromatic compounds catabolism.
 
 
 0.991
amb3594
Coenzyme F390 synthetase.
  
  
 
0.924
amb1245
Coenzyme F390 synthetase; Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA).
  
  
 
0.903
amb1668
Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidase.
    
  0.903
amb1241
Phenylacetyl CoA; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
     
 0.901
amb2015
Phenylacetyl CoA; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
     
 0.901
amb1242
Fe-S-cluster-containing hydrogenase components 1.
     
  0.900
amb1243
Phenylacetyl CoA.
     
  0.900
amb0173
NAD-dependent aldehyde dehydrogenase.
 
 
 0.700
amb2754
Acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.
 
  
 0.687
Your Current Organism:
Magnetospirillum magneticum
NCBI taxonomy Id: 342108
Other names: M. magneticum AMB-1, Magnetospirillum magneticum AMB-1, Magnetospirillum magneticum str. AMB-1, Magnetospirillum magneticum strain AMB-1, Magnetospirillum sp. (strain AMB-1), Magnetospirillum sp. AMB-1
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