STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
dadAGlycine/D-amino acid oxidase; Oxidative deamination of D-amino acids; Belongs to the DadA oxidoreductase family. (422 aa)    
Predicted Functional Partners:
thiG
Uncharacterized enzyme of thiazole biosynthesis; Catalyzes the rearrangement of 1-deoxy-D-xylulose 5-phosphate (DXP) to produce the thiazole phosphate moiety of thiamine. Sulfur is provided by the thiocarboxylate moiety of the carrier protein ThiS. In vitro, sulfur can be provided by H(2)S.
 
  
 0.980
amb0555
Aspartate aminotransferase A; EC 2611.
    
 0.908
amb0130
Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase.
   
 
 0.905
hisC
Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily.
   
 
 0.905
amb0766
Glycine cleavage system T protein.
  
 
 0.890
amb1817
Uncharacterized NAD(FAD)-dependent dehydrogenase.
  
 
 0.814
amb2173
Uncharacterized NAD(FAD)-dependent dehydrogenase.
  
 
 0.814
amb2800
Hemerythrin-like protein PA1673.
       0.773
amb2095
Alanine racemase; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family.
  
  
 0.698
amb0176
Ferredoxin-NADP reductase; Root-type isozyme, chloroplast precursor.
  
 
 0.647
Your Current Organism:
Magnetospirillum magneticum
NCBI taxonomy Id: 342108
Other names: M. magneticum AMB-1, Magnetospirillum magneticum AMB-1, Magnetospirillum magneticum str. AMB-1, Magnetospirillum magneticum strain AMB-1, Magnetospirillum sp. (strain AMB-1), Magnetospirillum sp. AMB-1
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