Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
amb2819Uncharacterized conserved protein. (215 aa)    
Predicted Functional Partners:
coq7
Ubiquinone biosynthesis protein COQ7; Catalyzes the hydroxylation of 2-nonaprenyl-3-methyl-6- methoxy-1,4-benzoquinol during ubiquinone biosynthesis.
  
 0.952
amb0630
Predicted unusual protein kinase; Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis. Belongs to the ABC1 family. UbiB subfamily.
   
 0.856
amb0012
2-polyprenyl-6-methoxyphenol hydroxylase; Related FAD-dependent oxidoreductase.
  
 0.734
amb0026
Hypothetical protein RP420.
  
     0.704
amb3819
ATPase involved in chromosome partitioning.
  
     0.695
rpsU
Ribosomal protein S21; Belongs to the bacterial ribosomal protein bS21 family.
       0.666
amb0259
2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductase.
   
 0.650
amb2975
Hypothetical protein.
  
 0.620
amb1343
WD40-like repeat.
  
     0.613
amb0081
SAM-dependent methyltransferase.
   
 0.608
Your Current Organism:
Magnetospirillum magneticum
NCBI taxonomy Id: 342108
Other names: M. magneticum AMB-1, Magnetospirillum magneticum AMB-1, Magnetospirillum magneticum str. AMB-1, Magnetospirillum magneticum strain AMB-1, Magnetospirillum sp. (strain AMB-1), Magnetospirillum sp. AMB-1
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