STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
amb2829Response regulator consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain. (303 aa)    
Predicted Functional Partners:
amb0290
Signal transduction histidine kinase.
   
 0.907
amb1370
Response regulator; Consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain.
   
  0.904
amb0980
CheY-like receiver.
  
   0.788
amb3331
FOG: CheY-like receiver.
  
   0.765
amb2246
Uncharacterized protein conserved in bacteria.
  
     0.731
amb3503
Hypothetical protein.
  
    0.728
amb3472
Uncharacterized protein conserved in bacteria.
  
     0.726
amb0558
Hypothetical protein.
  
   0.722
amb3825
Chemotactic signal-response protein cheL.
  
    0.693
amb3823
Flagellar assembly protein fliX.
  
     0.684
Your Current Organism:
Magnetospirillum magneticum
NCBI taxonomy Id: 342108
Other names: M. magneticum AMB-1, Magnetospirillum magneticum AMB-1, Magnetospirillum magneticum str. AMB-1, Magnetospirillum magneticum strain AMB-1, Magnetospirillum sp. (strain AMB-1), Magnetospirillum sp. AMB-1
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.