STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
amb2832Hypothetical protein. (268 aa)    
Predicted Functional Partners:
amb4492
Kinesin-like protein K39.
  
     0.653
amb2831
Hypothetical protein.
 
     0.640
amb3973
Chorismate mutase.
  
     0.640
amb2528
Periplasmic protein TonB, links inner and outer membranes.
  
     0.619
amb2366
Signal transduction histidine kinase; Nitrogen specific.
  
     0.606
amb3935
Uncharacterized protein conserved in bacteria.
  
     0.593
amb0544
Uncharacterized conserved protein.
  
     0.588
amb3841
Periplasmic protein TonB; Links inner and outer membranes.
  
     0.580
amb4422
Uncharacterized protein conserved in bacteria.
  
     0.579
amb1213
Permease of the major facilitator superfamily.
  
     0.565
Your Current Organism:
Magnetospirillum magneticum
NCBI taxonomy Id: 342108
Other names: M. magneticum AMB-1, Magnetospirillum magneticum AMB-1, Magnetospirillum magneticum str. AMB-1, Magnetospirillum magneticum strain AMB-1, Magnetospirillum sp. (strain AMB-1), Magnetospirillum sp. AMB-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.