STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
amb2839Exopolyphosphatase. (494 aa)    
Predicted Functional Partners:
ppk
Polyphosphate kinase; Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP). Belongs to the polyphosphate kinase 1 (PPK1) family.
 
  
 0.983
amb3778
Exopolyphosphatase.
  
  
0.932
amb2253
Guanosine polyphosphate pyrophosphohydrolase/synthetase; In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance.
 
 
 0.928
amb1697
Guanosine polyphosphate pyrophosphohydrolase/synthetase.
  
 
 0.915
amb2838
Uncharacterized protein; Conserved in bacteria; Belongs to the UPF0178 family.
       0.779
amb1371
Phosphate uptake regulator; Plays a role in the regulation of phosphate uptake.
     
 0.629
amb4473
Phosphate uptake regulator; Plays a role in the regulation of phosphate uptake.
     
 0.629
amb4494
Predicted signal transduction protein containing a membrane domain; EAL and a GGDEF domain.
      
 0.616
amb3969
Uncharacterized conserved protein.
 
  
 0.556
amb2351
Hypothetical protein.
 
 
   0.510
Your Current Organism:
Magnetospirillum magneticum
NCBI taxonomy Id: 342108
Other names: M. magneticum AMB-1, Magnetospirillum magneticum AMB-1, Magnetospirillum magneticum str. AMB-1, Magnetospirillum magneticum strain AMB-1, Magnetospirillum sp. (strain AMB-1), Magnetospirillum sp. AMB-1
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