Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
amb2856Flagellar capping protein. (362 aa)    
Predicted Functional Partners:
amb3827
Flagellar hook-associated protein; Belongs to the flagella basal body rod proteins family.
  
 
 0.988
amb0684
Flagellin and related hook-associated protein; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella.
  
 
 0.979
amb0504
Flagellar hook protein FlgE.
 
 
 0.977
amb0503
Flagellar biosynthesis/type III secretory pathway lipoprotein; The M ring may be actively involved in energy transduction. Belongs to the FliF family.
 
  
 0.967
amb3828
Hypothetical protein; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella.
  
 
 0.957
amb0505
Flagellar hook capping protein; Required for flagellar hook formation. May act as a scaffolding protein.
 
  
 0.955
amb0615
Flagellar basal body rod protein; Belongs to the flagella basal body rod proteins family.
 
  
 0.943
amb3654
Hypothetical 1041 kDa protein in hypE 3'region.
  
  
 0.942
amb0628
Flagellar biosynthesis/type III secretory pathway ATPase.
  
  
 0.940
amb0500
Flagellar motor switch/type III secretory pathway protein; FliN is one of three proteins (FliG, FliN, FliM) that form the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation. Belongs to the FliN/MopA/SpaO family.
 
  
 0.938
Your Current Organism:
Magnetospirillum magneticum
NCBI taxonomy Id: 342108
Other names: M. magneticum AMB-1, Magnetospirillum magneticum AMB-1, Magnetospirillum magneticum str. AMB-1, Magnetospirillum magneticum strain AMB-1, Magnetospirillum sp. (strain AMB-1), Magnetospirillum sp. AMB-1
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