Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
amb2886Acyl dehydratase. (155 aa)    
Predicted Functional Partners:
amb2885
Predicted xylanase/chitin deacetylase.
       0.773
amb2887
Permease of the major facilitator superfamily.
       0.773
amb2990
Glyoxysomal fatty acid beta-oxidation multifunctional protein MFP-a; Belongs to the enoyl-CoA hydratase/isomerase family.
  
 0.621
amb2888
Transcriptional regulator.
     
 0.565
amb2889
NADH:flavin oxidoreductase; Old Yellow Enzyme family.
     
 0.558
amb1949
Phenolpthiocerol synthesis polyketide synthase ppsA.
     
 0.532
amb0174
Enoyl-CoA hydratase/carnithine racemase.
 
 0.526
amb0308
Acyl-CoA dehydrogenase.
  
 0.521
amb0677
Acyl-CoA dehydrogenase.
  
 0.521
amb2024
Acyl-CoA dehydrogenase.
  
 0.521
Your Current Organism:
Magnetospirillum magneticum
NCBI taxonomy Id: 342108
Other names: M. magneticum AMB-1, Magnetospirillum magneticum AMB-1, Magnetospirillum magneticum str. AMB-1, Magnetospirillum magneticum strain AMB-1, Magnetospirillum sp. (strain AMB-1), Magnetospirillum sp. AMB-1
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