STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
amb2886Acyl dehydratase. (155 aa)    
Predicted Functional Partners:
amb2887
Permease of the major facilitator superfamily.
     
 0.780
amb2885
Predicted xylanase/chitin deacetylase.
       0.778
amb1949
Phenolpthiocerol synthesis polyketide synthase ppsA.
   
 
 0.710
amb4437
Dehydrogenase; Accepts electrons from ETF and reduces ubiquinone.
  
 
 0.603
amb2990
Glyoxysomal fatty acid beta-oxidation multifunctional protein MFP-a; Belongs to the enoyl-CoA hydratase/isomerase family.
  
 0.585
amb2888
Transcriptional regulator.
     
 0.569
amb2889
NADH:flavin oxidoreductase; Old Yellow Enzyme family.
     
 0.558
amb0174
Enoyl-CoA hydratase/carnithine racemase.
 
 0.484
amb0842
Acetyl-CoA acetyltransferase; phbA homolog; Belongs to the thiolase-like superfamily. Thiolase family.
  
 
 0.482
amb2595
Acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.
  
 
 0.482
Your Current Organism:
Magnetospirillum magneticum
NCBI taxonomy Id: 342108
Other names: M. magneticum AMB-1, Magnetospirillum magneticum AMB-1, Magnetospirillum magneticum str. AMB-1, Magnetospirillum magneticum strain AMB-1, Magnetospirillum sp. (strain AMB-1), Magnetospirillum sp. AMB-1
Server load: low (18%) [HD]