STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
amb2910Uncharacterized conserved protein. (229 aa)    
Predicted Functional Partners:
amb2911
Cation transport ATPase.
 
   
 0.837
amb2909
Predicted lipoprotein involved in nitrous oxide reduction.
 
     0.836
amb2912
Hypothetical protein.
       0.780
amb0516
Uncharacterized conserved protein.
  
     0.763
amb4363
Cbb3-type cytochrome oxidase, cytochrome c subunit.
 
     0.747
amb2913
Hypothetical protein.
       0.743
amb3355
Protein rdxB.
 
   
 0.692
amb4190
Protein rdxB.
 
   
 0.691
amb4366
Polyferredoxin.
 
   
 0.683
amb4365
Cytochrome c, mono- and diheme variants; C-type cytochrome. Part of the cbb3-type cytochrome c oxidase complex.
 
   
 0.640
Your Current Organism:
Magnetospirillum magneticum
NCBI taxonomy Id: 342108
Other names: M. magneticum AMB-1, Magnetospirillum magneticum AMB-1, Magnetospirillum magneticum str. AMB-1, Magnetospirillum magneticum strain AMB-1, Magnetospirillum sp. (strain AMB-1), Magnetospirillum sp. AMB-1
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