STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
amb2916ABC-type antimicrobial peptide transport system, ATPase component. (225 aa)    
Predicted Functional Partners:
amb2917
ABC-type transport system, involved in lipoprotein release, permease component.
 
 
 0.959
amb2915
Hypothetical protein.
 
     0.929
amb2541
ABC-type antimicrobial peptide transport system, permease component.
  
 
 0.835
amb2909
Predicted lipoprotein involved in nitrous oxide reduction.
 
     0.808
amb2765
ABC-type transport system; Involved in lipoprotein release, permease component.
 
 0.795
amb2914
Thiol-disulfide isomerase and thioredoxins.
       0.780
amb2572
ABC-type transport system, permease component; Involved in lipoprotein release.
 
 
 0.755
amb0017
Outer membrane lipoprotein-sorting protein; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane).
   
 
 0.701
amb1036
ATP-dependent Zn protease.
 
   
 0.667
amb1687
ATP-dependent Zn protease; Belongs to the AAA ATPase family.
 
   
 0.636
Your Current Organism:
Magnetospirillum magneticum
NCBI taxonomy Id: 342108
Other names: M. magneticum AMB-1, Magnetospirillum magneticum AMB-1, Magnetospirillum magneticum str. AMB-1, Magnetospirillum magneticum strain AMB-1, Magnetospirillum sp. (strain AMB-1), Magnetospirillum sp. AMB-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.