STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
amb2932Methylase of chemotaxis methyl-accepting protein. (473 aa)    
Predicted Functional Partners:
amb1432
Signal transduction histidine kinase.
 
 
 0.991
amb3004
Gliding motility regulatory protein.
 
 
 0.982
amb0326
Chemotaxis protein histidine kinase and related kinase.
  
 
 0.974
amb2930
Sensor protein barA.
 
 
 0.974
amb2936
Predicted ATPase.
 
 
 0.968
amb1956
Signal transduction histidine kinase.
 
 
 0.961
amb1112
Signal transduction histidine kinase.
 
 
 0.957
amb3195
Signal transduction histidine kinase.
 
 
 0.957
amb1466
Predicted ATPase.
 
 
 0.953
amb1947
Predicted ATPase.
 
 
 0.953
Your Current Organism:
Magnetospirillum magneticum
NCBI taxonomy Id: 342108
Other names: M. magneticum AMB-1, Magnetospirillum magneticum AMB-1, Magnetospirillum magneticum str. AMB-1, Magnetospirillum magneticum strain AMB-1, Magnetospirillum sp. (strain AMB-1), Magnetospirillum sp. AMB-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.